Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | SAMN04488494_0927 | Not Available | - | 639551 - 640084 | 19764.8 |
| solute:na+ symporter, sss family | SAMN04488494_0928 | Not Available | - | 640132 - 641661 | 54788.7 |
| hypothetical protein | SAMN04488494_0929 | Not Available | - | 641743 - 642831 | 40883.6 |
| protein of unknown function | SAMN04488494_0930 | Not Available | - | 643208 - 644428 | 43930.5 |
| outer membrane cobalamin receptor protein | SAMN04488494_0931 | Not Available | - | 644442 - 646604 | 81119.5 |
| oligosaccharide reducing-end xylanase | SAMN04488494_0932 | Not Available | - | 646741 - 648066 | 50598.7 |
| dna topoisomerase-3 | SAMN04488494_0933 | Not Available | + | 648200 - 650269 | 77724.4 |
| tetratricopeptide repeat-containing protein | SAMN04488494_0934 | Not Available | + | 650214 - 652328 | 78612.0 |
| protein of unknown function | SAMN04488494_0935 | Not Available | - | 652240 - 652623 | 14828.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488494_0936 | Not Available | - | 652613 - 653155 | 20462.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.