Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04488494_1671 | Not Available | + | 1504324 - 1505412 | 42022.5 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04488494_1672 | Not Available | + | 1505409 - 1506392 | 39003.0 |
| had-superfamily subfamily ib hydrolase, tigr01490 | SAMN04488494_1673 | Not Available | + | 1506389 - 1506973 | 22137.8 |
| hypothetical protein | SAMN04488494_1674 | Not Available | + | 1506970 - 1508373 | 55048.2 |
| hypothetical protein | SAMN04488494_1675 | Not Available | - | 1508395 - 1509420 | 40363.2 |
| lipopolysaccharide cholinephosphotransferase | SAMN04488494_1676 | Not Available | - | 1509417 - 1510223 | 31071.5 |
| nucleoside-diphosphate-sugar epimerase | SAMN04488494_1677 | Not Available | - | 1510220 - 1511272 | 38902.8 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | SAMN04488494_1678 | Not Available | - | 1511260 - 1511982 | 27126.3 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04488494_1679 | Not Available | - | 1511986 - 1513428 | 53866.0 |
| methionyl-trna synthetase | SAMN04488494_1680 | Not Available | - | 1513443 - 1515509 | 79399.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.