Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| serine phosphatase rsbu, regulator of sigma subunit | SAMN04488494_1610 | Not Available | - | 1427161 - 1429236 | 78124.7 |
| na+/melibiose symporter | SAMN04488494_1611 | Not Available | - | 1429319 - 1430710 | 50709.1 |
| sialate o-acetylesterase | SAMN04488494_1612 | Not Available | - | 1430719 - 1432671 | 73331.4 |
| glycoside/pentoside/hexuronide:cation symporter, gph family | SAMN04488494_1613 | Not Available | + | 1432836 - 1434284 | 53530.7 |
| glycosyl hydrolases family 43 | SAMN04488494_1614 | Not Available | + | 1434302 - 1435303 | 37881.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488494_1615 | Not Available | + | 1435296 - 1435790 | 19340.0 |
| predicted zn-dependent peptidase | SAMN04488494_1616 | Not Available | - | 1435783 - 1437033 | 46646.5 |
| 7-cyano-7-deazaguanine synthase | SAMN04488494_1617 | Not Available | - | 1437035 - 1437688 | 23998.4 |
| alpha-1,2-mannosidase, putative | SAMN04488494_1618 | Not Available | + | 1437773 - 1440385 | 98372.9 |
| signal transduction histidine kinase | SAMN04488494_1619 | Not Available | + | 1440382 - 1442223 | 70168.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.