Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein, upf0371 family | SAMN04488494_1538 | Not Available | - | 1335531 - 1336994 | 54736.8 |
| major facilitator superfamily protein | SAMN04488494_1539 | Not Available | - | 1336997 - 1338619 | 58759.4 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN04488494_1540 | Not Available | - | 1338663 - 1340840 | 82892.0 |
| yidc/oxa1 family membrane protein insertase | SAMN04488494_1541 | Not Available | - | 1340846 - 1342735 | 72124.2 |
| protein of unknown function | SAMN04488494_1542 | Not Available | + | 1342845 - 1344023 | 45113.1 |
| protein of unknown function | SAMN04488494_1543 | Not Available | - | 1344020 - 1344406 | 13998.1 |
| aspartyl-trna synthetase | SAMN04488494_1544 | Not Available | + | 1344547 - 1346328 | 67285.9 |
| winged helix-turn-helix domain | SAMN04488494_1545 | Not Available | + | 1346497 - 1346805 | 10452.8 |
| hypothetical protein | SAMN04488494_1546 | Not Available | + | 1346871 - 1347152 | 10717.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488494_1547 | Not Available | - | 1347119 - 1348261 | 44332.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.