Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, xre-family hth domain | SAMN04488494_1406 | Not Available | - | 1146255 - 1146470 | 7933.72 |
| peptidase m15 | SAMN04488494_1407 | Not Available | + | 1146826 - 1147293 | 18009.9 |
| protein of unknown function | SAMN04488494_1408 | Not Available | + | 1147290 - 1147790 | 18919.3 |
| twinkle protein | SAMN04488494_1409 | Not Available | + | 1147787 - 1149613 | 69056.2 |
| hypothetical protein | SAMN04488494_1410 | Not Available | + | 1149558 - 1149800 | 9656.93 |
| hypothetical protein | SAMN04488494_1411 | Not Available | - | 1149988 - 1151175 | 45706.9 |
| hypothetical protein | SAMN04488494_1412 | Not Available | + | 1151444 - 1151548 | 3810.81 |
| dna-binding protein, histone-like, putative | SAMN04488494_1413 | Not Available | + | 1151970 - 1152506 | 18701.1 |
| hypothetical protein | SAMN04488494_1414 | Not Available | + | 1152660 - 1152776 | 3926.12 |
| transcription-repair coupling factor (superfamily ii helicase) | SAMN04488494_1415 | Not Available | + | 1152889 - 1156251 | 127240.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.