Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN04488494_1386 | Not Available | - | 1121373 - 1125119 | 140239.0 |
| arabinose-5-phosphate isomerase | SAMN04488494_1387 | Not Available | - | 1125175 - 1126125 | 34685.5 |
| 2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase) | SAMN04488494_1388 | Not Available | - | 1126135 - 1126890 | 27275.1 |
| mechanosensitive ion channel | SAMN04488494_1389 | Not Available | - | 1126998 - 1129334 | 89244.9 |
| hypothetical protein | SAMN04488494_1390 | Not Available | + | 1129456 - 1130301 | 31245.3 |
| hypothetical protein | SAMN04488494_1391 | Not Available | - | 1130305 - 1131279 | 35775.0 |
| alpha-l-arabinofuranosidase | SAMN04488494_1392 | Not Available | - | 1131444 - 1133453 | 75491.2 |
| signal transduction histidine kinase | SAMN04488494_1393 | Not Available | + | 1133616 - 1135451 | 69200.2 |
| mfs transporter, sp family, xylose:h+ symportor | SAMN04488494_1394 | Not Available | + | 1135454 - 1136935 | 53805.4 |
| response regulator receiver domain-containing protein | SAMN04488494_1395 | Not Available | + | 1136947 - 1137303 | 13199.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.