Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit a | SAMN04488494_1366 | Not Available | - | 1092212 - 1095007 | 104695.0 |
| tagaturonate reductase | SAMN04488494_1367 | Not Available | - | 1095014 - 1096453 | 54345.6 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN04488494_1368 | Not Available | - | 1096566 - 1097159 | 22030.3 |
| oxaloacetate decarboxylase, beta subunit | SAMN04488494_1369 | Not Available | - | 1097156 - 1098313 | 40914.4 |
| biotin-requiring enzyme | SAMN04488494_1370 | Not Available | - | 1098351 - 1098803 | 15762.1 |
| oxaloacetate decarboxylase, gamma chain | SAMN04488494_1371 | Not Available | - | 1098809 - 1099834 | 37921.7 |
| putative transport protein | SAMN04488494_1372 | Not Available | - | 1099909 - 1101600 | 60943.5 |
| heterodimeric methylmalonyl-coa mutase small subunit | SAMN04488494_1373 | Not Available | + | 1101830 - 1103692 | 69357.5 |
| heterodimeric methylmalonyl-coa mutase large subunit precursor | SAMN04488494_1374 | Not Available | + | 1103712 - 1105877 | 80044.0 |
| dehydrogenase (flavoprotein) | SAMN04488494_1375 | Not Available | + | 1105880 - 1106932 | 39798.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.