Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 2 | SAMN04488494_1296 | Not Available | + | 1011260 - 1013119 | 69194.5 |
| rod shape determining protein roda | SAMN04488494_1297 | Not Available | + | 1013100 - 1014575 | 54972.7 |
| gliding motility-associated lipoprotein gldh | SAMN04488494_1298 | Not Available | - | 1014561 - 1015025 | 17780.6 |
| cell fate regulator yaat, psp1 superfamily (controls sporulation, competence, biofilm development) | SAMN04488494_1299 | Not Available | - | 1015015 - 1016166 | 43126.7 |
| dna polymerase-3 subunit delta' | SAMN04488494_1300 | Not Available | - | 1016193 - 1017305 | 42671.1 |
| 5,10-methylenetetrahydrofolate reductase (nad(p)) | SAMN04488494_1301 | Not Available | - | 1017312 - 1018277 | 36597.9 |
| bile acid:na+ symporter, bass family | SAMN04488494_1302 | Not Available | + | 1018337 - 1019287 | 35098.7 |
| arac-type dna-binding protein | SAMN04488494_1303 | Not Available | - | 1019284 - 1019736 | 17664.1 |
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN04488494_1304 | Not Available | - | 1019869 - 1021875 | 76006.0 |
| flavorubredoxin | SAMN04488494_1305 | Not Available | + | 1022033 - 1023199 | 43075.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.