Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, contains hepn domain | SAMN04488494_1152 | Not Available | + | 861725 - 862072 | 13564.4 |
| rep element-mobilizing transposase rayt | SAMN04488494_1153 | Not Available | - | 862113 - 862904 | 30660.5 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN04488494_1154 | Not Available | - | 863334 - 864026 | 25152.7 |
| glucose-6-phosphate isomerase | SAMN04488494_1155 | Not Available | - | 864108 - 865457 | 48970.8 |
| transcription antitermination factor nusg | SAMN04488494_1156 | Not Available | - | 865514 - 866455 | 36459.5 |
| fimbrillin-a associated anchor protein mfa1 and mfa2 | SAMN04488494_1157 | Not Available | + | 866714 - 867589 | 32148.9 |
| fimbrillin-a associated anchor protein mfa1 and mfa2 | SAMN04488494_1158 | Not Available | + | 867618 - 868517 | 32462.9 |
| capsular exopolysaccharide family | SAMN04488494_1159 | Not Available | + | 868552 - 871089 | 94463.3 |
| hypothetical protein | SAMN04488494_1160 | Not Available | + | 871117 - 871551 | 17001.2 |
| polysaccharide export outer membrane protein | SAMN04488494_1161 | Not Available | + | 871648 - 872406 | 27771.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.