Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| oligosaccharide repeat unit polymerase | SAMN04488494_1029 | Not Available | + | 729259 - 730509 | 47233.1 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04488494_1030 | Not Available | + | 730503 - 731783 | 47760.5 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN04488494_1031 | Not Available | + | 731879 - 732901 | 38248.1 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04488494_1032 | Not Available | + | 732905 - 734098 | 44338.9 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN04488494_1033 | Not Available | + | 734095 - 734682 | 22758.1 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN04488494_1034 | Not Available | + | 734679 - 735251 | 22669.1 |
| lipocalin-like domain-containing protein | SAMN04488494_1035 | Not Available | - | 735255 - 735695 | 16758.8 |
| capsule assembly protein wzi | SAMN04488494_1036 | Not Available | - | 735704 - 737179 | 55049.8 |
| hypothetical protein | SAMN04488494_1037 | Not Available | + | 737380 - 738219 | 33236.5 |
| probable phosphoglycerate mutase | SAMN04488494_1038 | Not Available | - | 738223 - 738729 | 19241.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.