Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine38-40 synthase | SAMN04488494_0917 | Not Available | - | 629244 - 629978 | 28238.7 |
| hypothetical protein | SAMN04488494_0918 | Not Available | - | 629972 - 630565 | 22022.3 |
| abc-2 type transport system permease protein | SAMN04488494_0919 | Not Available | - | 630568 - 631773 | 44919.6 |
| abc-2 type transport system permease protein | SAMN04488494_0920 | Not Available | - | 631757 - 632911 | 43311.1 |
| hlyd family secretion protein | SAMN04488494_0921 | Not Available | - | 632955 - 633947 | 36392.9 |
| outer membrane protein tolc | SAMN04488494_0922 | Not Available | - | 633956 - 635413 | 52982.1 |
| hypothetical protein | SAMN04488494_0923 | Not Available | - | 635422 - 636294 | 32800.4 |
| protein of unknown function | SAMN04488494_0924 | Not Available | + | 636466 - 636711 | 9527.81 |
| cytochrome d ubiquinol oxidase subunit i | SAMN04488494_0925 | Not Available | + | 636765 - 638297 | 56584.4 |
| cytochrome d ubiquinol oxidase subunit ii | SAMN04488494_0926 | Not Available | + | 638294 - 639442 | 42719.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.