Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor proteins, mostly fe transport | SAMN04488494_0876 | Not Available | + | 582951 - 585311 | 89552.4 |
| protein of unknown function | SAMN04488494_0877 | Not Available | + | 585433 - 587991 | 94973.2 |
| methylmalonyl-coa epimerase | SAMN04488494_0878 | Not Available | + | 588142 - 588552 | 14997.1 |
| acetyl-coa carboxylase, carboxyltransferase component | SAMN04488494_0879 | Not Available | + | 588595 - 590160 | 56900.3 |
| hypothetical protein | SAMN04488494_0880 | Not Available | + | 590197 - 590349 | 5604.51 |
| biotin-requiring enzyme | SAMN04488494_0881 | Not Available | + | 590352 - 590780 | 14920.9 |
| hypothetical protein | SAMN04488494_0882 | Not Available | - | 590860 - 591909 | 39432.5 |
| hypothetical protein | SAMN04488494_0883 | Not Available | + | 592036 - 593229 | 46673.6 |
| pyruvate-ferredoxin/flavodoxin oxidoreductase | SAMN04488494_0884 | Not Available | + | 593297 - 596875 | 131374.0 |
| hypothetical protein | SAMN04488494_0885 | Not Available | + | 596951 - 598066 | 42665.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.