Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cache domain-containing protein | SAMN04488494_0866 | Not Available | - | 573631 - 575112 | 56279.1 |
| hypothetical protein | SAMN04488494_0867 | Not Available | - | 575115 - 576083 | 36645.8 |
| rna polymerase primary sigma factor | SAMN04488494_0868 | Not Available | - | 576214 - 576918 | 26486.7 |
| Trna-arg | Not Available | Not Available | + | 577005 - 577081 | Not Available |
| Trna-arg | Not Available | Not Available | + | 577109 - 577185 | Not Available |
| arac-type dna-binding protein | SAMN04488494_0871 | Not Available | - | 577270 - 578154 | 33896.3 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04488494_0872 | Not Available | - | 578158 - 579045 | 32478.6 |
| regulator of protease activity hflc, stomatin/prohibitin superfamily | SAMN04488494_0873 | Not Available | - | 579063 - 580007 | 35089.6 |
| membrane protein implicated in regulation of membrane protease activity | SAMN04488494_0874 | Not Available | - | 580059 - 580508 | 16313.1 |
| spi protease inhibitor | SAMN04488494_0875 | Not Available | - | 580515 - 582836 | 84233.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.