Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3,4-dihydroxy 2-butanone 4-phosphate synthase / gtp cyclohydrolase ii | SAMN04488494_3006 | Not Available | + | 3090311 - 3091522 | 45246.8 |
| aspartate aminotransferase | SAMN04488494_3007 | Not Available | + | 3091604 - 3092818 | 44670.7 |
| biopolymer transport protein exbb | SAMN04488494_3008 | Not Available | + | 3092936 - 3093766 | 29038.3 |
| biopolymer transport protein exbd/tolr | SAMN04488494_3009 | Not Available | + | 3093809 - 3094426 | 23094.2 |
| biopolymer transport protein exbd/tolr | SAMN04488494_3010 | Not Available | + | 3094434 - 3095099 | 24931.3 |
| protein tonb | SAMN04488494_3011 | Not Available | + | 3095122 - 3095955 | 30702.7 |
| phosphate transport system substrate-binding protein | SAMN04488494_3012 | Not Available | + | 3095976 - 3096935 | 36169.4 |
| tetratricopeptide repeat-containing protein | SAMN04488494_3013 | Not Available | + | 3096990 - 3098438 | 54549.8 |
| 4fe-4s dicluster domain-containing protein | SAMN04488494_3014 | Not Available | - | 3098615 - 3098782 | 5648.64 |
| probable protein-translocating porin port | SAMN04488494_3015 | Not Available | + | 3098936 - 3099661 | 27642.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.