Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN04488494_2976 | Not Available | + | 3058306 - 3059958 | 61988.5 |
| trna(adenine34) deaminase | SAMN04488494_2977 | Not Available | - | 3060065 - 3060517 | 16632.1 |
| bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligase | SAMN04488494_2978 | Not Available | + | 3060633 - 3061346 | 26872.4 |
| uridylate kinase | SAMN04488494_2979 | Not Available | + | 3061408 - 3062118 | 25502.1 |
| protein of unknown function | SAMN04488494_2980 | Not Available | - | 3062123 - 3062506 | 14516.4 |
| cdp-diacylglycerol---serine o-phosphatidyltransferase | SAMN04488494_2981 | Not Available | - | 3062510 - 3063196 | 25233.3 |
| phosphatidylserine decarboxylase | SAMN04488494_2982 | Not Available | - | 3063224 - 3063913 | 25895.4 |
| dna polymerase-3 subunit alpha | SAMN04488494_2983 | Not Available | + | 3064057 - 3067788 | 140940.0 |
| thioredoxin | SAMN04488494_2984 | Not Available | + | 3067853 - 3068167 | 11552.0 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | SAMN04488494_2985 | Not Available | - | 3068197 - 3068610 | 15536.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.