Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| a/g-specific dna-adenine glycosylase | SAMN04488494_2885 | Not Available | - | 2946293 - 2947309 | 38627.3 |
| phosphoserine phosphatase | SAMN04488494_2886 | Not Available | - | 2947323 - 2948555 | 45782.5 |
| d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | SAMN04488494_2887 | Not Available | - | 2948613 - 2949842 | 44891.9 |
| carboxypepd_reg-like domain-containing protein | SAMN04488494_2888 | Not Available | - | 2949860 - 2951134 | 48586.1 |
| l-aspartate oxidase | SAMN04488494_2889 | Not Available | + | 2951196 - 2952782 | 59519.2 |
| dna primase | SAMN04488494_2890 | Not Available | + | 2952784 - 2954715 | 73010.3 |
| cardiolipin synthase | SAMN04488494_2891 | Not Available | + | 2954712 - 2956130 | 54669.8 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | SAMN04488494_2892 | Not Available | - | 2956102 - 2956704 | 22696.1 |
| protein of unknown function | SAMN04488494_2893 | Not Available | - | 2956701 - 2957501 | 30883.9 |
| uvrd-like helicase c-terminal domain-containing protein | SAMN04488494_2894 | Not Available | + | 2957674 - 2959098 | 53842.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.