Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminomethyltransferase | SAMN04488494_2855 | Not Available | + | 2915430 - 2916542 | 41198.7 |
| glycine cleavage system h protein | SAMN04488494_2856 | Not Available | + | 2916572 - 2916952 | 13802.9 |
| glycine dehydrogenase subunit 1 | SAMN04488494_2857 | Not Available | + | 2916983 - 2918299 | 48325.3 |
| glycine dehydrogenase subunit 2 | SAMN04488494_2858 | Not Available | + | 2918296 - 2919705 | 51554.7 |
| dihydrolipoamide dehydrogenase | SAMN04488494_2859 | Not Available | + | 2919726 - 2920979 | 44831.2 |
| phosphoribosylglycinamide formyltransferase-1 | SAMN04488494_2860 | Not Available | - | 2920997 - 2921563 | 20822.3 |
| diaminopimelate dehydrogenase | SAMN04488494_2861 | Not Available | - | 2921564 - 2922463 | 32861.6 |
| holliday junction dna helicase subunit ruva | SAMN04488494_2862 | Not Available | + | 2922666 - 2923268 | 21397.5 |
| cell surface protein spra | SAMN04488494_2863 | Not Available | + | 2923366 - 2930235 | 258315.0 |
| hypothetical protein | SAMN04488494_2864 | Not Available | - | 2930245 - 2930619 | 14204.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.