Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l17 | SAMN04488494_2805 | Not Available | + | 2835403 - 2835897 | 18171.9 |
| glycine zipper | SAMN04488494_2806 | Not Available | + | 2836048 - 2836728 | 24678.3 |
| rare lipoprotein a | SAMN04488494_2807 | Not Available | - | 2836737 - 2837249 | 18781.8 |
| glutamate dehydrogenase (nadp+) | SAMN04488494_2808 | Not Available | - | 2837303 - 2838640 | 48673.6 |
| two component transcriptional regulator, lyttr family | SAMN04488494_2809 | Not Available | - | 2838747 - 2839487 | 28247.5 |
| histidine kinase | SAMN04488494_2810 | Not Available | - | 2839509 - 2840600 | 42514.2 |
| outer membrane cobalamin receptor protein | SAMN04488494_2811 | Not Available | - | 2840662 - 2843121 | 89926.2 |
| o-acetylhomoserine (thiol)-lyase | SAMN04488494_2812 | Not Available | - | 2843252 - 2844535 | 46630.8 |
| muramoyltetrapeptide carboxypeptidase | SAMN04488494_2813 | Not Available | + | 2844680 - 2845630 | 34516.7 |
| hypothetical protein | SAMN04488494_2814 | Not Available | - | 2845651 - 2846103 | 18137.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.