Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gtp pyrophosphokinase | SAMN04488494_2690 | Not Available | + | 2719779 - 2722046 | 86744.0 |
| pectinesterase | SAMN04488494_2691 | Not Available | + | 2722061 - 2723035 | 36765.7 |
| c-terminal processing protease ctpa/prc, contains a pdz domain | SAMN04488494_2692 | Not Available | + | 2723085 - 2726327 | 122981.0 |
| dna-binding transcriptional regulator, merr family | SAMN04488494_2693 | Not Available | - | 2726363 - 2726710 | 13493.5 |
| alanyl-trna synthetase | SAMN04488494_2694 | Not Available | + | 2726842 - 2729505 | 99718.3 |
| topoisomerase-4 subunit a | SAMN04488494_2695 | Not Available | + | 2729597 - 2732269 | 101618.0 |
| protein of unknown function | SAMN04488494_2696 | Not Available | + | 2732253 - 2733017 | 28933.3 |
| tricorn protease c1 domain-containing protein | SAMN04488494_2697 | Not Available | + | 2733014 - 2734009 | 38001.6 |
| Trna-leu | Not Available | Not Available | + | 2734138 - 2734218 | Not Available |
| hypothetical protein | SAMN04488494_2699 | Not Available | + | 2734428 - 2736440 | 71997.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.