Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase d | SAMN04488494_2670 | Not Available | - | 2699507 - 2700943 | 54622.3 |
| imp dehydrogenase | SAMN04488494_2671 | Not Available | - | 2700943 - 2702424 | 53019.0 |
| atp-dependent dna helicase recq | SAMN04488494_2672 | Not Available | - | 2702463 - 2704643 | 82204.4 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN04488494_2673 | Not Available | - | 2704657 - 2705895 | 46185.0 |
| atp-dependent clp protease, protease subunit | SAMN04488494_2674 | Not Available | - | 2705901 - 2706569 | 24741.7 |
| trigger factor | SAMN04488494_2675 | Not Available | - | 2706700 - 2708061 | 51556.6 |
| lipopolysaccharide export system atp-binding protein | SAMN04488494_2676 | Not Available | - | 2708166 - 2708948 | 29767.1 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN04488494_2677 | Not Available | + | 2709095 - 2709841 | 27374.4 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN04488494_2678 | Not Available | + | 2709838 - 2710611 | 28964.2 |
| anti-sigma regulatory factor (ser/thr protein kinase) | SAMN04488494_2679 | Not Available | + | 2710735 - 2711148 | 15621.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.