Xylanibacter ruminicola

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Xylanibacter

Description

Xylanibacter ruminicola is a Gram-negative, rod-shaped bacterium that is nonsporulating and classified as an anaerobe. This microbe is primarily associated with host environments, suggesting its role in specific biological systems where it may contribute to various metabolic processes. Xylanibacter ruminicola thrives in anaerobic conditions, which is indicative of its adaptation to environments such as the gastrointestinal tracts of ruminants. While its precise interactions within the host ecosystem remain to be fully elucidated, the bacterium likely plays a significant role in the fermentation of plant polysaccharides, particularly xylans, contributing to the overall digestive efficiency of the host. The nonsporulating nature of Xylanibacter ruminicola suggests that it relies on stable, conducive environments for survival and reproduction, further emphasizing its specialization within host-associated habitats. Understanding the metabolic capabilities and ecological interactions of Xylanibacter ruminicola may provide insights into its potential utility in enhancing the digestive processes of ruminants, thereby influencing agricultural practices related to livestock management and feed efficiency. This highlights the importance of anaerobic microorganisms in the maintenance of host health and nutrient cycling within their ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusXylanibacter
SpeciesXylanibacter ruminicola
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xylanibacter ruminicola

Accession NumberFRCJ00000000.1

Gene Summary

Adenine Count

957861 bp

Thymine Count

956378 bp

Guanine Count

868579 bp

Cytosine Count

875474 bp

Genome Length

3658292 bp

Protein-coding Genes

3072 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinSAMN04488494_2659Not Available-2684949 - 268592338486.1
atp-dependent dna helicase recgSAMN04488494_2660Not Available-2685942 - 268748058235.9
site-specific recombinase xerdSAMN04488494_2661Not Available-2687553 - 268908259314.6
atp-dependent clp protease atp-binding subunit clpaSAMN04488494_2663Not Available+2689773 - 269195081334.3
leucyl/phenylalanyl-trna--protein transferaseSAMN04488494_2664Not Available+2691928 - 269257824504.3
putative efflux protein, mate familySAMN04488494_2665Not Available-2693075 - 269446349165.3
Trna-valNot AvailableNot Available+2694528 - 2694605Not Available
dna mismatch repair protein mutlSAMN04488494_2667Not Available-2694701 - 269653967445.9
osta-like proteinSAMN04488494_2668Not Available-2696549 - 269815061645.6
periplasmic chaperone for outer membrane proteins suraSAMN04488494_2669Not Available-2698131 - 269951052190.6

Displaying genes 2281 – 2290 of 3125 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites