Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate-sugar epimerase | SAMN04488494_2586 | Not Available | - | 2599770 - 2600798 | 37963.3 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | SAMN04488494_2587 | Not Available | - | 2600815 - 2601528 | 26414.1 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN04488494_2588 | Not Available | - | 2601541 - 2602089 | 20825.7 |
| hypothetical protein | SAMN04488494_2589 | Not Available | - | 2602190 - 2602657 | 18251.5 |
| hypothetical protein | SAMN04488494_2590 | Not Available | - | 2603044 - 2604111 | 40039.4 |
| protein involved in polysaccharide export, contains slbb domain of the beta-grasp fold | SAMN04488494_2591 | Not Available | - | 2604118 - 2606580 | 89633.0 |
| beta-galactosidase | SAMN04488494_2592 | Not Available | - | 2606666 - 2609029 | 89310.8 |
| alpha-glucuronidase | SAMN04488494_2593 | Not Available | + | 2609137 - 2611056 | 72794.7 |
| predicted neuraminidase (sialidase) | SAMN04488494_2594 | Not Available | - | 2611075 - 2612136 | 39301.8 |
| pp_02180 | SAMN04488494_2595 | Not Available | - | 2612164 - 2613243 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.