Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyl-hydrolase 97 c-terminal, oligomerisation | SAMN04488494_2556 | Not Available | - | 2567996 - 2569915 | 71462.7 |
| glucosamine-6-phosphate deaminase | SAMN04488494_2557 | Not Available | - | 2569965 - 2570759 | 29250.9 |
| gtp-binding protein hflx | SAMN04488494_2558 | Not Available | + | 2570928 - 2572259 | 50485.6 |
| protein of unknown function | SAMN04488494_2559 | Not Available | + | 2572252 - 2574114 | 70291.2 |
| udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferase | SAMN04488494_2560 | Not Available | - | 2574147 - 2575304 | 43191.3 |
| udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferase | SAMN04488494_2561 | Not Available | - | 2575301 - 2576413 | 40777.6 |
| n-acetylmuramoyl-l-alanine amidase | SAMN04488494_2562 | Not Available | - | 2576570 - 2577010 | 16632.0 |
| hypothetical protein | SAMN04488494_2563 | Not Available | - | 2577027 - 2577137 | 3833.91 |
| dna-binding protein, histone-like, putative | SAMN04488494_2564 | Not Available | - | 2577309 - 2577890 | 20704.1 |
| chc2 zinc finger | SAMN04488494_2565 | Not Available | - | 2578353 - 2579378 | 39365.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.