Xylanibacter ruminicola

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Xylanibacter

Description

Xylanibacter ruminicola is a Gram-negative, rod-shaped bacterium that is nonsporulating and classified as an anaerobe. This microbe is primarily associated with host environments, suggesting its role in specific biological systems where it may contribute to various metabolic processes. Xylanibacter ruminicola thrives in anaerobic conditions, which is indicative of its adaptation to environments such as the gastrointestinal tracts of ruminants. While its precise interactions within the host ecosystem remain to be fully elucidated, the bacterium likely plays a significant role in the fermentation of plant polysaccharides, particularly xylans, contributing to the overall digestive efficiency of the host. The nonsporulating nature of Xylanibacter ruminicola suggests that it relies on stable, conducive environments for survival and reproduction, further emphasizing its specialization within host-associated habitats. Understanding the metabolic capabilities and ecological interactions of Xylanibacter ruminicola may provide insights into its potential utility in enhancing the digestive processes of ruminants, thereby influencing agricultural practices related to livestock management and feed efficiency. This highlights the importance of anaerobic microorganisms in the maintenance of host health and nutrient cycling within their ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusXylanibacter
SpeciesXylanibacter ruminicola
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xylanibacter ruminicola

Accession NumberFRCJ00000000.1

Gene Summary

Adenine Count

957861 bp

Thymine Count

956378 bp

Guanine Count

868579 bp

Cytosine Count

875474 bp

Genome Length

3658292 bp

Protein-coding Genes

3072 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
rna methyltransferase, trmh familySAMN04488494_2546Not Available+2551993 - 255274827799.5
adenosylhomocysteine nucleosidaseSAMN04488494_2547Not Available+2552882 - 255349922871.5
s-ribosylhomocysteine lyase /quorum-sensing autoinducer 2 (ai-2) synthesis protein luxsSAMN04488494_2548Not Available+2553544 - 255403818881.7
small subunit ribosomal protein s15SAMN04488494_2549Not Available-2554117 - 255438610385.7
gtp-binding proteinSAMN04488494_2550Not Available+2554666 - 255646867748.7
outer membrane receptor proteins, mostly fe transportSAMN04488494_2551Not Available-2556604 - 255907892070.4
atp-dependent clp protease atp-binding subunit clpbSAMN04488494_2552Not Available+2559329 - 256183994030.6
m6 family metalloprotease domain-containing proteinSAMN04488494_2553Not Available-2561846 - 256321651658.2
fumarase, class i, homodimericSAMN04488494_2554Not Available-2563288 - 256493760387.5
predicted zn-dependent peptidaseSAMN04488494_2555Not Available-2564982 - 2567948112258.0

Displaying genes 2171 – 2180 of 3125 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites