Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytidylate kinase-like family protein | SAMN04488494_2505 | Not Available | - | 2496696 - 2497313 | 23356.9 |
| putative efflux protein, mate family | SAMN04488494_2506 | Not Available | - | 2497320 - 2498681 | 50162.2 |
| subtilase family protein | SAMN04488494_2507 | Not Available | + | 2498788 - 2500230 | 53502.7 |
| exodeoxyribonuclease vii large subunit | SAMN04488494_2508 | Not Available | + | 2500249 - 2501484 | 46171.9 |
| exodeoxyribonuclease vii small subunit | SAMN04488494_2509 | Not Available | + | 2501491 - 2501679 | 7245.86 |
| branched-chain amino acid aminotransferase | SAMN04488494_2510 | Not Available | + | 2501769 - 2502785 | 38048.3 |
| atp-binding protein involved in chromosome partitioning | SAMN04488494_2511 | Not Available | - | 2502823 - 2503950 | 40519.2 |
| trna (guanine-n7-)-methyltransferase | SAMN04488494_2512 | Not Available | - | 2503950 - 2504720 | 30187.1 |
| b3/b4 domain-containing protein (dna/rna-binding domain of phe-trna-synthetase) | SAMN04488494_2513 | Not Available | - | 2504891 - 2505559 | 24270.9 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN04488494_2514 | Not Available | - | 2505556 - 2506431 | 32912.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.