Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| stage ii sporulation protein aa (anti-sigma f factor antagonist) | SAMN04488494_2473 | Not Available | + | 2469474 - 2469776 | 11383.8 |
| ppgpp synthetase catalytic domain-containing protein (rela/spot-type nucleotidyltranferase) | SAMN04488494_2474 | Not Available | + | 2469776 - 2470825 | 39718.5 |
| n-acetylglutamate kinase | SAMN04488494_2475 | Not Available | + | 2470849 - 2471622 | 27198.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488494_2476 | Not Available | + | 2471681 - 2472199 | 20318.3 |
| hypothetical protein | SAMN04488494_2477 | Not Available | + | 2472189 - 2472668 | 18090.3 |
| hypothetical protein | SAMN04488494_2478 | Not Available | - | 2472828 - 2473598 | 28503.9 |
| riboflavin kinase / fmn adenylyltransferase | SAMN04488494_2479 | Not Available | - | 2473607 - 2474524 | 34259.6 |
| Trna-met | Not Available | Not Available | + | 2474690 - 2474763 | Not Available |
| hypothetical protein | SAMN04488494_2481 | Not Available | - | 2474914 - 2475063 | 6000.38 |
| protein of unknown function | SAMN04488494_2482 | Not Available | - | 2475101 - 2475571 | 18573.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.