Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polyribonucleotide nucleotidyltransferase | SAMN04488494_2463 | Not Available | - | 2457096 - 2459483 | 88869.5 |
| peroxiredoxin | SAMN04488494_2464 | Not Available | + | 2459604 - 2460758 | 42878.9 |
| protein of unknown function | SAMN04488494_2465 | Not Available | - | 2460798 - 2461085 | 10638.3 |
| acetyl esterase/lipase | SAMN04488494_2466 | Not Available | - | 2461096 - 2461944 | 31406.2 |
| sialate o-acetylesterase | SAMN04488494_2467 | Not Available | + | 2462060 - 2463511 | 54530.7 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04488494_2468 | Not Available | + | 2463518 - 2464051 | 20014.6 |
| dna topoisomerase-1 | SAMN04488494_2469 | Not Available | + | 2464139 - 2466535 | 90830.5 |
| shikimate kinase | SAMN04488494_2470 | Not Available | + | 2466532 - 2467059 | 20231.8 |
| arginine decarboxylase | SAMN04488494_2471 | Not Available | + | 2467083 - 2468975 | 71725.2 |
| anti-sigma regulatory factor (ser/thr protein kinase) | SAMN04488494_2472 | Not Available | + | 2469048 - 2469467 | 15495.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.