Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488494_2403 | Not Available | + | 2370014 - 2371339 | 50747.6 |
| hypothetical protein | SAMN04488494_2404 | Not Available | - | 2371623 - 2373509 | 67230.1 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN04488494_2405 | Not Available | + | 2373879 - 2374496 | 23336.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488494_2406 | Not Available | + | 2374533 - 2377673 | 116318.0 |
| hypothetical protein | SAMN04488494_2407 | Not Available | + | 2377722 - 2378897 | 43755.4 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMN04488494_2408 | Not Available | + | 2378944 - 2379423 | 17346.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488494_2409 | Not Available | + | 2379834 - 2381108 | 47808.5 |
| serine o-acetyltransferase | SAMN04488494_2410 | Not Available | + | 2381105 - 2381683 | 21138.8 |
| glycosyl transferase family 2 | SAMN04488494_2411 | Not Available | + | 2381685 - 2382488 | 30395.1 |
| alpha amylase, catalytic domain | SAMN04488494_2412 | Not Available | - | 2382493 - 2384283 | 66624.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.