Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carboxypepd_reg-like domain-containing protein | SAMN04488494_2372 | Not Available | - | 2310861 - 2313380 | 95400.0 |
| glpgli family protein | SAMN04488494_2373 | Not Available | - | 2313393 - 2314280 | 34752.6 |
| signal transducer regulating beta-lactamase production, contains metallopeptidase domain | SAMN04488494_2374 | Not Available | - | 2314289 - 2315539 | 45957.1 |
| predicted transcriptional regulator | SAMN04488494_2375 | Not Available | - | 2315536 - 2315922 | 14926.0 |
| signal transduction histidine kinase | SAMN04488494_2377 | Not Available | + | 2316933 - 2320937 | 149677.0 |
| predicted alpha-1,6-mannanase, gh76 family | SAMN04488494_2378 | Not Available | - | 2320891 - 2322033 | 42753.2 |
| suse outer membrane protein | SAMN04488494_2379 | Not Available | - | 2322051 - 2323175 | 40610.4 |
| starch-binding associating with outer membrane | SAMN04488494_2380 | Not Available | - | 2323229 - 2324866 | 61982.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488494_2381 | Not Available | - | 2324866 - 2328003 | 116558.0 |
| alpha-1,2-mannosidase, putative | SAMN04488494_2382 | Not Available | - | 2328056 - 2330203 | 81573.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.