Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, laci family | SAMN04488494_2332 | Not Available | - | 2241408 - 2242406 | 37297.1 |
| stage ii sporulation protein e (spoiie) | SAMN04488494_2333 | Not Available | - | 2242748 - 2244841 | 78726.9 |
| succinate coa transferase | SAMN04488494_2334 | Not Available | - | 2244868 - 2246373 | 54933.6 |
| hemolysin iii | SAMN04488494_2335 | Not Available | - | 2246456 - 2247103 | 24383.9 |
| polygalacturonase | SAMN04488494_2336 | Not Available | - | 2247151 - 2248611 | 54347.1 |
| Trna-leu | Not Available | Not Available | + | 2248680 - 2248764 | Not Available |
| mannose-1-phosphate guanylyltransferase | SAMN04488494_2338 | Not Available | + | 2248918 - 2250018 | 42028.2 |
| histidine triad (hit) family protein | SAMN04488494_2339 | Not Available | - | 2250019 - 2250411 | 14954.1 |
| transcription elongation factor grea | SAMN04488494_2340 | Not Available | - | 2250443 - 2250910 | 17116.5 |
| pap2 superfamily protein | SAMN04488494_2341 | Not Available | - | 2251055 - 2252011 | 36759.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.