Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative negative regulator of rcsb-dependent stress response | SAMN04488494_2279 | Not Available | - | 2192634 - 2193317 | 24573.9 |
| hypothetical protein | SAMN04488494_2280 | Not Available | - | 2193274 - 2193378 | 4108.81 |
| dna replication and repair protein recf | SAMN04488494_2281 | Not Available | + | 2193459 - 2194559 | 42144.7 |
| protein of unknown function | SAMN04488494_2282 | Not Available | + | 2194552 - 2194842 | 11189.7 |
| 5-formyltetrahydrofolate cyclo-ligase | SAMN04488494_2283 | Not Available | - | 2194835 - 2195380 | 20617.1 |
| carboxyl-terminal processing protease | SAMN04488494_2284 | Not Available | - | 2195373 - 2197073 | 63758.5 |
| dcmp deaminase | SAMN04488494_2285 | Not Available | - | 2197077 - 2197514 | 16266.5 |
| peptidyl-dipeptidase dcp | SAMN04488494_2286 | Not Available | - | 2197486 - 2199600 | 81812.4 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488494_2287 | Not Available | - | 2199733 - 2200410 | 26421.0 |
| thiamine biosynthesis lipoprotein | SAMN04488494_2288 | Not Available | - | 2200417 - 2201442 | 37839.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.