Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyl transferase | SAMN04488494_2185 | Not Available | - | 2093572 - 2094513 | 35031.7 |
| surface antigen | SAMN04488494_2186 | Not Available | - | 2094607 - 2096943 | 88887.9 |
| family of unknown function | SAMN04488494_2187 | Not Available | - | 2096933 - 2101606 | 173061.0 |
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN04488494_2188 | Not Available | - | 2101611 - 2102282 | 25239.6 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | SAMN04488494_2189 | Not Available | - | 2102310 - 2103047 | 25818.2 |
| transcriptional regulator, tetr family | SAMN04488494_2190 | Not Available | - | 2103080 - 2103673 | 22954.7 |
| Trna-met | Not Available | Not Available | + | 2103888 - 2103963 | Not Available |
| transglycosylase slt domain-containing protein | SAMN04488494_2192 | Not Available | - | 2104099 - 2104545 | 16615.4 |
| dna mismatch repair protein muts2 | SAMN04488494_2193 | Not Available | - | 2104773 - 2107346 | 97152.8 |
| Trna-ser | Not Available | Not Available | + | 2107478 - 2107565 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.