Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nicotinamide mononucleotide transporter | SAMN04488494_1722 | Not Available | - | 1564663 - 1565247 | 22834.4 |
| iron complex outermembrane recepter protein | SAMN04488494_1723 | Not Available | - | 1565247 - 1567598 | 88307.2 |
| phosphate:na+ symporter | SAMN04488494_1724 | Not Available | - | 1567862 - 1569598 | 64873.2 |
| uridine kinase | SAMN04488494_1725 | Not Available | + | 1569717 - 1571384 | 63460.2 |
| dna polymerase i | SAMN04488494_1726 | Not Available | - | 1571386 - 1574151 | 104428.0 |
| octaprenyl-diphosphate synthase | SAMN04488494_1727 | Not Available | + | 1574239 - 1575213 | 36264.7 |
| deoxyribose-phosphate aldolase | SAMN04488494_1728 | Not Available | - | 1575328 - 1576269 | 34738.7 |
| ntp pyrophosphatase, house-cleaning of non-canonical ntps | SAMN04488494_1729 | Not Available | - | 1576299 - 1576625 | 12475.9 |
| protein of unknown function | SAMN04488494_1730 | Not Available | - | 1576622 - 1576870 | 9514.4 |
| d-tyrosyl-trna(tyr) deacylase | SAMN04488494_1731 | Not Available | - | 1576874 - 1577326 | 16672.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.