Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xtp/ditp diphosphohydrolase | SAMN04488494_1568 | Not Available | + | 1372449 - 1373330 | 33783.2 |
| lipocalin-like | SAMN04488494_1569 | Not Available | + | 1373347 - 1374030 | 25562.4 |
| ribonuclease z | SAMN04488494_1570 | Not Available | + | 1374047 - 1374961 | 34518.3 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488494_1571 | Not Available | + | 1375043 - 1375351 | 11021.9 |
| l,d-transpeptidase catalytic domain | SAMN04488494_1572 | Not Available | + | 1375300 - 1376790 | 55965.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488494_1573 | Not Available | + | 1376760 - 1377257 | 19304.5 |
| hypothetical protein | SAMN04488494_1574 | Not Available | + | 1377301 - 1377654 | 13283.8 |
| hypothetical protein | SAMN04488494_1575 | Not Available | + | 1377668 - 1378108 | 17238.1 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN04488494_1576 | Not Available | - | 1378098 - 1378733 | 24003.1 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN04488494_1577 | Not Available | - | 1378735 - 1379661 | 35316.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.