Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fucose 4-o-acetylase | SAMN04488494_1558 | Not Available | - | 1358997 - 1360040 | 40463.7 |
| fucose 4-o-acetylase | SAMN04488494_1559 | Not Available | + | 1360102 - 1361115 | 39549.5 |
| uncharacterised nucleotidyltransferase | SAMN04488494_1560 | Not Available | - | 1361112 - 1362029 | 36114.6 |
| putative abc transport system permease protein | SAMN04488494_1561 | Not Available | - | 1362026 - 1362772 | 26812.4 |
| putative abc transport system atp-binding protein | SAMN04488494_1562 | Not Available | - | 1362769 - 1363371 | 21917.6 |
| agmatine/peptidylarginine deiminase | SAMN04488494_1563 | Not Available | + | 1363456 - 1364472 | 38481.6 |
| n-carbamoylputrescine amidase | SAMN04488494_1564 | Not Available | + | 1364469 - 1365353 | 33243.7 |
| glutamine synthetase | SAMN04488494_1565 | Not Available | + | 1365396 - 1367588 | 82989.4 |
| thiol:disulfide interchange protein dsbd | SAMN04488494_1566 | Not Available | + | 1367604 - 1369619 | 73256.0 |
| valyl-trna synthetase | SAMN04488494_1567 | Not Available | - | 1369650 - 1372358 | 103400.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.