Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rhamnulose-1-phosphate aldolase | SAMN04488494_1518 | Not Available | + | 1303816 - 1304649 | 30660.2 |
| hypothetical protein | SAMN04488494_1519 | Not Available | + | 1304649 - 1307462 | 104259.0 |
| starch-binding associating with outer membrane | SAMN04488494_1520 | Not Available | - | 1307563 - 1309677 | 78120.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488494_1521 | Not Available | - | 1309699 - 1312719 | 109598.0 |
| polygalacturonase | SAMN04488494_1522 | Not Available | - | 1312925 - 1317727 | 181809.0 |
| tryptophan synthase, alpha chain | SAMN04488494_1523 | Not Available | - | 1317835 - 1318611 | 28503.5 |
| phosphoribosylanthranilate isomerase | SAMN04488494_1524 | Not Available | - | 1318640 - 1319308 | 24972.0 |
| indole-3-glycerol phosphate synthase | SAMN04488494_1525 | Not Available | - | 1319305 - 1320090 | 28622.4 |
| anthranilate phosphoribosyltransferase | SAMN04488494_1526 | Not Available | - | 1320153 - 1321163 | 36935.4 |
| anthranilate synthase, component ii | SAMN04488494_1527 | Not Available | - | 1321198 - 1321761 | 20808.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.