Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488494_1508 | Not Available | - | 1286975 - 1290097 | 118856.0 |
| glycosyl hydrolase family 115 | SAMN04488494_1509 | Not Available | - | 1290104 - 1292395 | 87444.8 |
| l-glyceraldehyde 3-phosphate reductase | SAMN04488494_1510 | Not Available | + | 1292566 - 1293537 | 36916.1 |
| lysophospholipase l1 | SAMN04488494_1511 | Not Available | + | 1293524 - 1295218 | 62765.6 |
| l-rhamnose mutarotase | SAMN04488494_1512 | Not Available | + | 1295233 - 1295550 | 12291.5 |
| glycosyl hydrolases family 2, tim barrel domain | SAMN04488494_1513 | Not Available | + | 1295582 - 1298257 | 101726.0 |
| glycosyl hydrolases family 28 | SAMN04488494_1514 | Not Available | + | 1298380 - 1299699 | 49968.7 |
| rhamnulokinase | SAMN04488494_1515 | Not Available | + | 1299692 - 1301176 | 55685.8 |
| l-rhamnose isomerase | SAMN04488494_1516 | Not Available | + | 1301183 - 1302433 | 47559.3 |
| mfs transporter, sp family, inositol transporter | SAMN04488494_1517 | Not Available | + | 1302471 - 1303832 | 48737.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.