Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04488494_1436 | Not Available | + | 1196865 - 1198865 | 74580.2 |
| beta-galactosidase, domain 2 | SAMN04488494_1437 | Not Available | + | 1198953 - 1201298 | 87058.1 |
| resb-like family protein | SAMN04488494_1438 | Not Available | - | 1201326 - 1202699 | 52652.1 |
| nitrite reductase (cytochrome c-552) | SAMN04488494_1439 | Not Available | - | 1202723 - 1204282 | 59136.4 |
| cytochrome c nitrite reductase small subunit | SAMN04488494_1440 | Not Available | - | 1204333 - 1204950 | 22971.8 |
| 4fe-4s binding domain-containing protein | SAMN04488494_1441 | Not Available | - | 1205053 - 1205748 | 26235.0 |
| lysr family transcriptional regulator, hydrogen peroxide-inducible genes activator | SAMN04488494_1442 | Not Available | + | 1205886 - 1206812 | 35352.0 |
| serine o-acetyltransferase | SAMN04488494_1443 | Not Available | + | 1206917 - 1207837 | 33966.0 |
| mfs transporter, pat family, beta-lactamase induction signal transducer ampg | SAMN04488494_1444 | Not Available | - | 1207851 - 1209125 | 47543.0 |
| spoiid/lytb domain protein | SAMN04488494_1445 | Not Available | - | 1209157 - 1212831 | 139684.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.