Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Xylanibacter ruminicola
Accession NumberFRCJ00000000.1
Gene Summary
Adenine Count
957861 bp
Thymine Count
956378 bp
Guanine Count
868579 bp
Cytosine Count
875474 bp
Genome Length
3658292 bp
Protein-coding Genes
3072 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488494_1426 | Not Available | - | 1170733 - 1173954 | 119495.0 |
| glycosyl hydrolases family 2, sugar binding domain | SAMN04488494_1427 | Not Available | - | 1174147 - 1176534 | 89612.1 |
| rhamnogalacturonyl hydrolase yesr | SAMN04488494_1428 | Not Available | - | 1176561 - 1177724 | 43741.0 |
| beta-galactosidase | SAMN04488494_1429 | Not Available | - | 1177732 - 1180128 | 91084.0 |
| lysophospholipase l1 | SAMN04488494_1430 | Not Available | + | 1180304 - 1181482 | 44291.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488494_1431 | Not Available | + | 1181613 - 1184750 | 114672.0 |
| starch-binding associating with outer membrane | SAMN04488494_1432 | Not Available | + | 1184790 - 1186925 | 79646.8 |
| two component regulator propeller | SAMN04488494_1433 | Not Available | - | 1187045 - 1191283 | 159861.0 |
| rhamnogalacturonan endolyase | SAMN04488494_1434 | Not Available | + | 1191430 - 1193388 | 72528.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488494_1435 | Not Available | + | 1193543 - 1196830 | 121423.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.