Porphyromonas gingivalis str. KCOM 2805

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Porphyromonas

Description

Porphyromonas gingivalis str. KCOM 2805 is a Gram-negative, nonsporulating rod-shaped bacterium that thrives in anaerobic conditions, with an optimal growth temperature of 37.0°C. This microbe is primarily associated with host environments, indicating a close relationship with its biological hosts, which is characteristic of many members of the genus Porphyromonas. As a strict anaerobe, P. gingivalis str. KCOM 2805 relies on environments devoid of oxygen, which is typical for bacteria residing in the oral cavity, particularly in subgingival sites where it may contribute to complex microbial communities. The specific adaptation to host-associated habitats suggests a potential role in the oral microbiome, where it may interact with other microbial species and host tissues. This strain's characteristics highlight its ecological niche within the oral environment, where it may participate in symbiotic or pathogenic interactions, depending on the context of the host's health. Understanding the traits of P. gingivalis str. KCOM 2805 can provide insights into the dynamics of microbial communities in the oral cavity and the conditions that favor the growth of anaerobic bacteria in these specialized environments. The study of such traits may also contribute to a broader understanding of microbial behavior in host-associated habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPorphyromonadaceae
GenusPorphyromonas
SpeciesPorphyromonas gingivalis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Porphyromonas gingivalis str. KCOM 2805
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Porphyromonas gingivalis str. KCOM 2805

Accession NumberNZ_CP024594.1

Gene Summary

Adenine Count

642555 bp

Thymine Count

642524 bp

Guanine Count

600317 bp

Cytosine Count

597521 bp

Genome Length

2482917 bp

Protein-coding Genes

2146 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
trna guanosine(34) transglycosylase tgtCS548_RS08980Not Available-1965948 - 196707842848.6
s-ribosylhomocysteine lyaseCS548_RS08985Not Available-1967222 - 196770118555.4
5'-methylthioadenosine/adenosylhomocysteine nucleosidaseCS548_RS08990Not Available-1967726 - 196841225051.3
t9ss type a sorting domain-containing proteinCS548_RS08995Not Available-1968814 - 197020853257.0
s46 family peptidaseCS548_RS09015Not Available-1971233 - 197337180111.6
duf389 domain-containing proteinCS548_RS09020Not Available-1973387 - 197480552231.9
lipopolysaccharide biosynthesis proteinCS548_RS09025Not Available-1974827 - 197633257006.5
holliday junction branch migration dna helicase ruvbCS548_RS09030Not Available-1976355 - 197738637756.2
methylated-dna--[protein]-cysteine s-methyltransferaseCS548_RS09040Not Available+1978281 - 197879319035.1
preprotein translocase subunit yajcCS548_RS09045Not Available+1978876 - 197921412574.5

Displaying genes 1751 – 1760 of 2213 in total

Pathways

23 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites