Porphyromonas gingivalis str. KCOM 2805

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Porphyromonadaceae

Genus

Porphyromonas

Description

Porphyromonas gingivalis str. KCOM 2805 is a Gram-negative, nonsporulating rod-shaped bacterium that thrives in anaerobic conditions, with an optimal growth temperature of 37.0°C. This microbe is primarily associated with host environments, indicating a close relationship with its biological hosts, which is characteristic of many members of the genus Porphyromonas. As a strict anaerobe, P. gingivalis str. KCOM 2805 relies on environments devoid of oxygen, which is typical for bacteria residing in the oral cavity, particularly in subgingival sites where it may contribute to complex microbial communities. The specific adaptation to host-associated habitats suggests a potential role in the oral microbiome, where it may interact with other microbial species and host tissues. This strain's characteristics highlight its ecological niche within the oral environment, where it may participate in symbiotic or pathogenic interactions, depending on the context of the host's health. Understanding the traits of P. gingivalis str. KCOM 2805 can provide insights into the dynamics of microbial communities in the oral cavity and the conditions that favor the growth of anaerobic bacteria in these specialized environments. The study of such traits may also contribute to a broader understanding of microbial behavior in host-associated habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPorphyromonadaceae
GenusPorphyromonas
SpeciesPorphyromonas gingivalis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Porphyromonas gingivalis str. KCOM 2805
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Porphyromonas gingivalis str. KCOM 2805

Accession NumberNZ_CP024594.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2146 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
duf1661 domain-containing proteinCS548_RS11770Not Available-110859 - 1109513555.4
duf1661 domain-containing proteinCS548_RS11295Not Available+110920 - 11130614419.4
atp-dependent clp protease atp-binding subunitCS548_RS00505Not Available+111326 - 11390595499.6
glycoside hydrolase family 3 n-terminal domain-containing proteinCS548_RS00510Not Available+114044 - 117055110947.0
pyridoxal phosphate-dependent aminotransferaseCS548_RS00515Not Available+117103 - 11813139025.6
2-phosphosulfolactate phosphataseCS548_RS00520Not Available+118141 - 11891128013.7
sigma-54-dependent transcriptional regulatorCS548_RS00525Not Available+119744 - 12109349281.4
sensor histidine kinaseCS548_RS00530Not Available+121104 - 12244150100.7
duf5686 family proteinCS548_RS00535Not Available+122445 - 12469186240.3
marr family winged helix-turn-helix transcriptional regulatorCS548_RS00540Not Available+124776 - 12548026850.2

Displaying genes 101 – 110 of 2213 in total

Pathways

23 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites