Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus
Accession NumberMNQV00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hu family dna-binding protein | EAJ12_02520 | Not Available | - | 658915 - 659187 | 9278.25 |
| rhomboid family intramembrane serine protease | EAJ12_02525 | Not Available | + | 659398 - 660075 | 25332.5 |
| rhomboid family intramembrane serine protease | EAJ12_02530 | Not Available | + | 660056 - 660949 | 33974.6 |
| endonuclease | EAJ12_02535 | Not Available | + | 660953 - 662032 | 40305.9 |
| m3 family peptidase | EAJ12_02540 | Not Available | + | 662059 - 664146 | 78974.4 |
| protein translocase subunit secdf | EAJ12_02545 | Not Available | + | 664325 - 667312 | 109234.0 |
| sugar kinase | EAJ12_02550 | Not Available | - | 667577 - 668641 | 38944.4 |
| nad-dependent epimerase/dehydratase family protein | EAJ12_02555 | Not Available | - | 668784 - 669737 | 35269.3 |
| glycine c-acetyltransferase | EAJ12_02560 | Not Available | + | 669908 - 671098 | 43568.4 |
| Trna-arg | Not Available | Not Available | + | 671166 - 671240 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
