Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus
Accession NumberMNQV00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5-dehydro-4-deoxy-d-glucuronate isomerase | EAJ12_00615 | Not Available | - | 137033 - 137989 | 35966.2 |
| pts sugar transporter subunit iic | EAJ12_00620 | Not Available | - | 138008 - 139399 | 49988.1 |
| glycoside hydrolase family 88 protein | EAJ12_00625 | Not Available | + | 139688 - 140917 | 47055.0 |
| pectin esterase | EAJ12_00630 | Not Available | + | 140932 - 141882 | 35857.5 |
| susc/raga family tonb-linked outer membrane protein | EAJ12_00635 | Not Available | + | 142100 - 145372 | 118880.0 |
| ragb/susd family nutrient uptake outer membrane protein | EAJ12_00640 | Not Available | + | 145405 - 147570 | 79682.8 |
| glycoside hydrolase | EAJ12_00645 | Not Available | + | 147950 - 149938 | 75028.2 |
| hypothetical protein | EAJ12_00655 | Not Available | + | 150482 - 153028 | 94942.7 |
| 5s ribosomal rna | Not Available | Not Available | + | 151606 - 151716 | Not Available |
| carbohydrate esterase | EAJ12_00660 | Not Available | + | 153091 - 154611 | 55734.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
