Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus
Accession NumberMNQV00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| o-succinylbenzoate synthase | EAJ12_04995 | Not Available | - | 1215695 - 1216750 | 39848.0 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | EAJ12_05000 | Not Available | - | 1216828 - 1217649 | 30339.4 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | EAJ12_05005 | Not Available | - | 1217649 - 1219322 | 62975.0 |
| isochorismate synthase | EAJ12_05010 | Not Available | - | 1219349 - 1220491 | 43157.4 |
| hotdog fold thioesterase | EAJ12_05015 | Not Available | - | 1220488 - 1220895 | 14546.4 |
| mate family efflux transporter | EAJ12_05020 | Not Available | - | 1220987 - 1222336 | 49603.2 |
| pyridine nucleotide-disulfide oxidoreductase | EAJ12_05025 | Not Available | + | 1222573 - 1225074 | 90774.7 |
| marr family transcriptional regulator | EAJ12_05030 | Not Available | + | 1225108 - 1225437 | 12226.9 |
| clc family h(+)/cl(-) exchange transporter | EAJ12_05035 | Not Available | + | 1225470 - 1227068 | 59620.1 |
| diacylglucosamine hydrolase | EAJ12_05040 | Not Available | + | 1227078 - 1227668 | 22791.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
