Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus
Accession NumberMNQV00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide export protein | EAJ12_04845 | Not Available | + | 1184024 - 1184824 | 29352.7 |
| polysaccharide biosynthesis tyrosine autokinase | EAJ12_04850 | Not Available | + | 1184862 - 1187273 | 89860.9 |
| sdr family oxidoreductase | EAJ12_04855 | Not Available | + | 1187693 - 1188559 | 30909.7 |
| lipopolysaccharide biosynthesis protein | EAJ12_04860 | Not Available | + | 1188569 - 1190107 | 58119.8 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | EAJ12_04865 | Not Available | + | 1190111 - 1191847 | 65428.4 |
| polysaccharide pyruvyl transferase family protein | EAJ12_04870 | Not Available | + | 1191912 - 1193069 | 44317.1 |
| o-antigen ligase domain-containing protein | EAJ12_04875 | Not Available | + | 1193183 - 1194433 | 48397.2 |
| glycosyl hydrolase | EAJ12_04880 | Not Available | + | 1194411 - 1195502 | 44068.3 |
| glycosyltransferase family 2 protein | EAJ12_04885 | Not Available | + | 1195506 - 1196435 | 35914.2 |
| glycosyltransferase | EAJ12_04890 | Not Available | + | 1196447 - 1197370 | 36082.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
