Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus
Accession NumberMNQV00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetylxylan esterase | EAJ12_03345 | Not Available | - | 849725 - 851035 | 49264.2 |
| m48 family peptidase | EAJ12_03350 | Not Available | - | 851056 - 851760 | 27179.3 |
| duf2807 domain-containing protein | EAJ12_03355 | Not Available | + | 851867 - 852598 | 25978.6 |
| hypothetical protein | EAJ12_03360 | Not Available | - | 852796 - 853275 | 18339.8 |
| rna polymerase sigma factor | EAJ12_03365 | Not Available | - | 853265 - 853774 | 20188.3 |
| acetylglutamate kinase | EAJ12_03370 | Not Available | - | 853838 - 854611 | 27207.2 |
| biosynthetic arginine decarboxylase | EAJ12_03375 | Not Available | - | 854616 - 856508 | 71492.0 |
| shikimate kinase | EAJ12_03380 | Not Available | - | 856550 - 857077 | 20453.7 |
| type i dna topoisomerase | EAJ12_03385 | Not Available | - | 857074 - 859512 | 91433.3 |
| tonb-dependent receptor | EAJ12_03390 | Not Available | - | 859634 - 861331 | 64307.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
