Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus
Accession NumberMNQV00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| omph family outer membrane protein | EAJ12_02985 | Not Available | - | 762238 - 762753 | 18937.6 |
| outer membrane protein assembly factor bama | EAJ12_02990 | Not Available | - | 762774 - 765416 | 100717.0 |
| isoprenyl transferase | EAJ12_02995 | Not Available | - | 765428 - 766159 | 28080.5 |
| hypothetical protein | EAJ12_03000 | Not Available | - | 766193 - 767590 | 52270.0 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | EAJ12_03005 | Not Available | - | 767718 - 768770 | 39640.4 |
| peptide chain release factor n(5)-glutamine methyltransferase | EAJ12_03010 | Not Available | + | 768815 - 769651 | 31912.4 |
| recx family transcriptional regulator | EAJ12_03015 | Not Available | + | 769653 - 770138 | 18855.8 |
| comf family protein | EAJ12_03020 | Not Available | + | 770119 - 770814 | 26038.9 |
| orotate phosphoribosyltransferase | EAJ12_03025 | Not Available | + | 770914 - 771552 | 23412.4 |
| srpbcc family protein | EAJ12_03030 | Not Available | + | 771650 - 772054 | 15197.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
