Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus
Accession NumberMNQV00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
10
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | EAJ12_02935 | Not Available | - | 752358 - 754034 | 60893.8 |
| site-specific tyrosine recombinase xerd | EAJ12_02940 | Not Available | - | 754176 - 755117 | 36180.1 |
| type ii 3-dehydroquinate dehydratase | EAJ12_02945 | Not Available | + | 755184 - 755606 | 15666.9 |
| pyruvate kinase | EAJ12_02950 | Not Available | + | 755639 - 757102 | 54241.6 |
| methyltransferase | EAJ12_02955 | Not Available | + | 757118 - 757756 | 24383.5 |
| 30s ribosome-binding factor rbfa | EAJ12_02960 | Not Available | + | 757830 - 758165 | 12972.9 |
| abc transporter permease | EAJ12_02965 | Not Available | + | 758175 - 759413 | 45708.0 |
| pyridoxamine kinase | EAJ12_02970 | Not Available | - | 759800 - 760672 | 32692.3 |
| glutamate racemase | EAJ12_02975 | Not Available | - | 760729 - 761574 | 31392.0 |
| omph family outer membrane protein | EAJ12_02980 | Not Available | - | 761677 - 762180 | 19260.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
