Phocaeicola vulgatus

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola vulgatus is a Gram-positive, anaerobic rod-shaped bacterium predominantly found in host-associated environments. This microbe typically exists as single cells rather than in clusters or chains, which is characteristic of its morphological traits. As an anaerobe, P. vulgatus thrives in environments devoid of oxygen, suggesting its adaptation to the anaerobic conditions often present in host-associated habitats, such as the gastrointestinal tract of various animals. The ability of P. vulgatus to maintain its viability and metabolic activity in low-oxygen environments highlights its potential role in the microbial communities that inhabit these niches. Its presence may be significant in the context of host-microbe interactions, contributing to the complex dynamics of gut microbiota, although specific functional roles and interactions require further investigation. Overall, P. vulgatus exemplifies the diversity of anaerobic bacteria associated with host organisms, emphasizing the intricate relationships that exist within microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola vulgatus
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Phocaeicola vulgatus
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phocaeicola vulgatus

Accession NumberMNQV00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

10

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
transposaseDWZ72_20720Not Available-4839021 - 483965625026.1
Trna-aspNot AvailableNot Available+4839915 - 4839988Not Available
Trna-aspNot AvailableNot Available+4840152 - 4840225Not Available
formyltetrahydrofolate deformylaseDWZ72_20735Not Available+4840490 - 484134733273.6
imidazole glycerol phosphate synthase subunit hishDWZ72_20740Not Available+4841347 - 484193722269.8
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseDWZ72_20745Not Available+4841979 - 484269826636.3
imidazole glycerol phosphate synthase subunit hisfDWZ72_20750Not Available+4842708 - 484346327219.5
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisieDWZ72_20755Not Available+4843628 - 484423923137.6
atp-binding cassette domain-containing proteinDWZ72_20760Not Available+4844244 - 484499928405.2
aspartate kinaseDWZ72_20765Not Available+4845107 - 484642649296.1

Displaying genes 34041 – 34050 of 34247 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites