Phocaeicola vulgatus str. CL10T00C06

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola vulgatus str. CL10T00C06 is a Gram-positive, rod-shaped bacterium that exists as single cells and is classified as an anaerobe, indicating its metabolic processes occur in the absence of oxygen. This strain is notably host-associated, suggesting a potential symbiotic relationship with its host organism. As an anaerobic bacterium, P. vulgatus str. CL10T00C06 may play a crucial role in various biochemical processes within its host, potentially contributing to gut health, nutrient absorption, or fermentation of dietary fibers. The specific habitat of this strain underscores its ecological significance, as host-associated microbes often participate in complex interactions within the microbiome, influencing both host physiology and microbial community dynamics. Understanding the traits of P. vulgatus str. CL10T00C06 enhances our knowledge of the functional diversity found in anaerobic bacteria and their contributions to the overall health of the microbiological ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola vulgatus
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Phocaeicola vulgatus str. CL10T00C06
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phocaeicola vulgatus str. CL10T00C06

Accession NumberNTHZ00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4025 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinCK234_04027Not Available-4803490 - 480379811345.7
hypothetical proteinCK234_04028Not Available-4803946 - 480522650110.4
single stranded dna-binding protein (ssb)CK234_04029Not Available+4806367 - 480674414227.7
y4mf family transcriptional regulatorCK234_04030Not Available+4806971 - 480727911646.2
hypothetical proteinCK234_04031Not Available+4808580 - 480884910425.4
protein of unknown function (duf3791)CK234_04032Not Available+4808921 - 480937017702.2
protein of unknown function (duf3990)CK234_04033Not Available+4809367 - 480984618186.0
hypothetical proteinCK234_04034Not Available+4809868 - 48101289998.22
putative toxin, pezt-likeCK234_04035Not Available+4810115 - 481096932265.9
integrase core domain proteinCK234_04036Not Available+4811255 - 481282060435.6

Displaying genes 4031 – 4040 of 4110 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites